local pairwise sequence alignment Search Results


basic local alignment search tool protein  (Biotechnology Information)
90
Biotechnology Information basic local alignment search tool protein
Basic Local Alignment Search Tool Protein, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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basic local alignment sequence tool (blastn) search engine  (Biotechnology Information)
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Biotechnology Information basic local alignment sequence tool (blastn) search engine
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Basic Local Alignment Sequence Tool (Blastn) Search Engine, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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basic local alignment sequence tool (blastn) search engine - by Bioz Stars, 2026-05
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pairwise sequence alignment  (Technical Manufacturing Company)
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Technical Manufacturing Company pairwise sequence alignment
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Pairwise Sequence Alignment, supplied by Technical Manufacturing Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pairwise sequence alignment - by Bioz Stars, 2026-05
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basic local alignment search tool for nucleotide sequences  (Biotechnology Information)
90
Biotechnology Information basic local alignment search tool for nucleotide sequences
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Basic Local Alignment Search Tool For Nucleotide Sequences, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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basic local alignment search tool for nucleotide sequences - by Bioz Stars, 2026-05
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pairwise sequence alignment tool clustal w bioedit 7.2  (Bioedit Company)
90
Bioedit Company pairwise sequence alignment tool clustal w bioedit 7.2
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Pairwise Sequence Alignment Tool Clustal W Bioedit 7.2, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pairwise sequence alignment tool clustal w bioedit 7.2 - by Bioz Stars, 2026-05
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tblastn (protein query sequence against translated nucleotide database) protocol blast (basic local alignment search tool)  (Biotechnology Information)
90
Biotechnology Information tblastn (protein query sequence against translated nucleotide database) protocol blast (basic local alignment search tool)
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Tblastn (Protein Query Sequence Against Translated Nucleotide Database) Protocol Blast (Basic Local Alignment Search Tool), supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tblastn (protein query sequence against translated nucleotide database) protocol blast (basic local alignment search tool) - by Bioz Stars, 2026-05
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pairwise sequence alignment  (Moderna)
90
Moderna pairwise sequence alignment
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Pairwise Sequence Alignment, supplied by Moderna, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pairwise sequence alignment tool  (ChunLab Inc)
90
ChunLab Inc pairwise sequence alignment tool
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Pairwise Sequence Alignment Tool, supplied by ChunLab Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pairwise sequence alignment tool - by Bioz Stars, 2026-05
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sequence search tool (nucleotide-nucleotide basic local alignment search tool search)  (Biotechnology Information)
90
Biotechnology Information sequence search tool (nucleotide-nucleotide basic local alignment search tool search)
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Sequence Search Tool (Nucleotide Nucleotide Basic Local Alignment Search Tool Search), supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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sequence search tool (nucleotide-nucleotide basic local alignment search tool search) - by Bioz Stars, 2026-05
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emboss needle pairwise sequence alignment bioinformatic tool  (HealthTech Connex Inc)
90
HealthTech Connex Inc emboss needle pairwise sequence alignment bioinformatic tool
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Emboss Needle Pairwise Sequence Alignment Bioinformatic Tool, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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emboss needle pairwise sequence alignment bioinformatic tool - by Bioz Stars, 2026-05
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local blast programme bioedit sequence alignment editor version 5.0.9  (Bioedit Company)
90
Bioedit Company local blast programme bioedit sequence alignment editor version 5.0.9
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Local Blast Programme Bioedit Sequence Alignment Editor Version 5.0.9, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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clustalw pairwise protein sequence alignment  (MacVector inc)
90
MacVector inc clustalw pairwise protein sequence alignment
Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and <t>GenBank</t> sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup
Clustalw Pairwise Protein Sequence Alignment, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and GenBank sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup

Journal: Parasites & Vectors

Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics

doi: 10.1186/s13071-023-06098-0

Figure Lengend Snippet: Phylogenetic tree of selected representatives of Babesia sp. inferred from 18S rRNA. The evolutionary history was inferred by using the maximum likelihood method and the Tamura 3-parameter model. The analysis contains Babesia vogeli 18S rRNA sequences identified in the current study (bold and marked red dots) and GenBank sequences. Accession numbers of sequences, host species, and country of origin are displayed. Bootstrap values are represented as per cent of internal branches (1000 replicates); values < 50 are hidden. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. This analysis involved 23 nucleotide sequences. There were a total of 410 positions in the final dataset. Sequences AF176835 and EU289222 were used as outgroup

Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

Techniques:

Sequencing analyses of the gene fragments amplified for TBPs species detected in blood samples and Rhipicephalus sanguineus s.l. tick species collected from domestic dogs ( Canis lupus familiaris ) in Cuba

Journal: Parasites & Vectors

Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics

doi: 10.1186/s13071-023-06098-0

Figure Lengend Snippet: Sequencing analyses of the gene fragments amplified for TBPs species detected in blood samples and Rhipicephalus sanguineus s.l. tick species collected from domestic dogs ( Canis lupus familiaris ) in Cuba

Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

Techniques: Sequencing, Amplification